The detailed information of tRNA gene sequence


Sequence ID>WENV170968210
Genome IDMTKW01007107
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6312
End posion on genome 6236
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtataaaaat
tRNA gene sequence 
GGTGGCGTAGTTCAGTTGGTTAGAATGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCGAG
TCTCGTCGTCACCGCAA
Downstream region at tRNA end position 
agtgcgtaat
Secondary structure (Cloverleaf model)
>WENV170968210	Asp	GTC
                   t      GCAA agtgcgtaat
                     G - C
                     G - C
                     T - A
                     G - C
                     G + T
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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