The detailed information of tRNA gene sequence


Sequence ID>WENV170968283
Genome IDMTKW01007674
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 797
End posion on genome 708
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tttgatgccc
tRNA gene sequence 
GGAGGGGTGTCGGAGCGGCTGAACGAGCCCGCCTCGAAAGCGGGTAGGCGTGCAAGCGCC
TCGTGGGTTCAAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
atcgatatac
Secondary structure (Cloverleaf model)
>WENV170968283	Ser	CGA
                   c      GCCA atcgatatac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G G C T       G T G G G     C
    G         | | |                 T T
    C       A C G A
      T G A        G     TAGGCGTGCAAGCGCCTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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