The detailed information of tRNA gene sequence


Sequence ID>WENV170968393
Genome IDMTKW01008799
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 11613
End posion on genome 11522
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttatttataa
tRNA gene sequence 
GGAGAGGTGGCCGAGTTGGTCGAAGGCGCGCGCCTGGAAAGTGCGTAAACTCCAAAAGGG
TTTCGTGGGTTCGAATCCCACTCTCTCCGCAA
Downstream region at tRNA end position 
cgacaatatt
Secondary structure (Cloverleaf model)
>WENV170968393	Ser	GGA
                   a      GCAA cgacaatatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G C C G       G T G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TAAACTCCAAAAGGGTTTC
                    C - G
                    G - C
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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