The detailed information of tRNA gene sequence


Sequence ID>WENV170968405
Genome IDMTKW01008988
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4401
End posion on genome 4474
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agcgtaattc
tRNA gene sequence 
GGCCCCGTAGCCAAGTGGTAAGGCATGGCTCTGCAAAAGCTTGACCACCGGTTCAAATCC
GGTCGGGGCCTCCA
Downstream region at tRNA end position 
aannnnnnnn
Secondary structure (Cloverleaf model)
>WENV170968405	Cys	GCA
                   c      TCCA aannnnnnnn
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G G C C     A
        G A        A      | | | | |     A
      T     A C C G       A C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GACC
                    T   T
                    G + T
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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