The detailed information of tRNA gene sequence


Sequence ID>WENV170968431
Genome IDMTKW01009102
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1399
End posion on genome 1324
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
gcaaccaaat
tRNA gene sequence 
GCCCACGTAGCTCAGTAGGCAGAGCGTCGCCTTGGTAAGGCGGAGGTCACCAGTTCAATC
CTGGTCGTGGGCTCCA
Downstream region at tRNA end position 
taagaaacat
Secondary structure (Cloverleaf model)
>WENV170968431	Thr	GGT
                   t      TCCA taagaaacat
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          C T
                    T     T G G T C     A
      T G A        A      | | | | |     A
    A       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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