The detailed information of tRNA gene sequence


Sequence ID>WENV170968452
Genome IDMTKW01009464
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12773
End posion on genome 12862
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gatcaaacgt
tRNA gene sequence 
GGAGGGATGTCCGAGCGGCCGAAGGAGCACGCCTGGAGAGCGTGTAGACGGTTTTCCGTC
TCGTGGGTTCAAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
aaagtttata
Secondary structure (Cloverleaf model)
>WENV170968452	Ser	GGA
                   t      GCCA aaagtttata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G T G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TAGACGGTTTTCCGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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