The detailed information of tRNA gene sequence


Sequence ID>WENV170968539
Genome IDMTKW01010952
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1254
End posion on genome 1178
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
aaatattaat
tRNA gene sequence 
GCAGGAGTAGTTCAATTGGTTAGAATATCTGTTTTCCAAACAGAGGGTTGCGGGTTCGAG
TCCCGTCTCCTGCTCCA
Downstream region at tRNA end position 
atatttacag
Secondary structure (Cloverleaf model)
>WENV170968539	Gly	TCC
                   t      TCCA atatttacag
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTT
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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