The detailed information of tRNA gene sequence


Sequence ID>WENV170968580
Genome IDMTKW01011716
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 10198
End posion on genome 10287
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aagaaatcaa
tRNA gene sequence 
GGAGAGGTGACAGAGCGGCCGAATGTGGCGGTCTCGAAAACCGTTGGGCGCGCAAGCGTC
CCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gcctattcta
Secondary structure (Cloverleaf model)
>WENV170968580	Ser	CGA
                   a      GCCA gcctattcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G A C A       G T G G G     C
    G         | | |                 T T
    C       A T G T
      C G A        G     TGGGCGCGCAAGCGTCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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