The detailed information of tRNA gene sequence


Sequence ID>WENV170968725
Genome IDMTKW01013276
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 731
End posion on genome 821
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttcatattgc
tRNA gene sequence 
GGAGAGGTGGCTGAGTTGGTCTAAGGCGCTCGCCTGGAGAGCGAGTAGGCGGGGAACCGC
CTCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttttgtcta
Secondary structure (Cloverleaf model)
>WENV170968725	Ser	GGA
                   c      GCCA tttttgtcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G T C G       G T G G G     C
  G           + | |                 T T
  T         A G G C
    C T A          G     TAGGCGGGGAACCGCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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