The detailed information of tRNA gene sequence


Sequence ID>WENV170968814
Genome IDMTKW01014983
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3996
End posion on genome 3907
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaatttaaaa
tRNA gene sequence 
GGAGAGATGGGTGAGTGGCTGAAACCAGCAGTTTGCTAAACTGCGATACTCGCAAGGGTA
TCGGGGGTTCGAATCCCCCTCTCTCCGCTA
Downstream region at tRNA end position 
ttatatttca
Secondary structure (Cloverleaf model)
>WENV170968814	Ser	GCT
                   a      GCTA ttatatttca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     GATACTCGCAAGGGTATC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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