The detailed information of tRNA gene sequence


Sequence ID>WENV170968914
Genome IDMTKW01016677
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 174
End posion on genome 83
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttagggatac
tRNA gene sequence 
GGAGAAGTACTCAAGTTGGCTCAAGAGGACGGTTTGCTAAACCGTTAGGCCGGGCAACTG
GCGCATGGGTTCGAATCCCATCTTCTCCGCCA
Downstream region at tRNA end position 
tatgcagggg
Secondary structure (Cloverleaf model)
>WENV170968914	Ser	GCT
                   c      GCCA tatgcagggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T A C C C     A
    T T G A        A      | | | | |     G
  G         A C T C       A T G G G     C
  G           | | |                 T T
  C         A G A G
    T C A          G     TAGGCCGGGCAACTGGCGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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