The detailed information of tRNA gene sequence


Sequence ID>WENV170969045
Genome IDMTKW01019416
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 59972
End posion on genome 60061
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggaccaggcc
tRNA gene sequence 
GGAGGGATGGCCGAGCGGTTGAAGGCGGCGGTCTTGAAAACCGTTGGGCGCGCAAGCGCC
TCGGGGGTTCGAATCCCCCTCCCTCCGCCA
Downstream region at tRNA end position 
gacactcgct
Secondary structure (Cloverleaf model)
>WENV170969045	Ser	TGA
                   c      GCCA gacactcgct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGGGCGCGCAAGCGCCTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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