The detailed information of tRNA gene sequence


Sequence ID>WENV170969103
Genome IDMTKW01020512
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12852
End posion on genome 12928
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accagtatgc
tRNA gene sequence 
CGCGGAGTAGAGCAGTCCGGAAGCTCGTCGGGCTCATAACCCGGAGGTCAAAGGTTCAAA
TCCTTTCTCCGCAACCA
Downstream region at tRNA end position 
actaagagaa
Secondary structure (Cloverleaf model)
>WENV170969103	Met	CAT
                   c      ACCA actaagagaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T T T C C     A
      T G A        A      | | | | |     A
    C       C G A G       A A A G G     C
    C       | | | |                 T T
    G       G C T C
      G A A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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