The detailed information of tRNA gene sequence


Sequence ID>WENV170969113
Genome IDMTKW01020618
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1465
End posion on genome 1375
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatagcttgc
tRNA gene sequence 
GGAGAGATGGCTGAGCTGGTCGAAAGCGCTCGCCTCGAAAGCGAGTAGGCGGGGAACCGC
CTCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tagattctga
Secondary structure (Cloverleaf model)
>WENV170969113	Ser	CGA
                   c      GCCA tagattctga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G T G G G     C
  G           | | |                 T T
  T         A A G C
    C G A          G     TAGGCGGGGAACCGCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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