The detailed information of tRNA gene sequence


Sequence ID>WENV170969114
Genome IDMTKW01020618
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1336
End posion on genome 1246
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccatattgc
tRNA gene sequence 
GGAGAGGTGGCTGAGTTGGTCTAAGGCGCTCGCCTGGAGAGCGAGTAGGCGGGGAACCGC
CTCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttttgttca
Secondary structure (Cloverleaf model)
>WENV170969114	Ser	GGA
                   c      GCCA tttttgttca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G T C G       G T G G G     C
  G           + | |                 T T
  T         A G G C
    C T A          G     TAGGCGGGGAACCGCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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