The detailed information of tRNA gene sequence


Sequence ID>WENV170969195
Genome IDMTKW01022257
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1321
End posion on genome 1396
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agcataaact
tRNA gene sequence 
AGGAGTGTAGTTCAGTTGGTAGAACGTCGGTCTCCAAAACCGAATGTCGTGGGTTCGAGT
CCTGCCACTCCTGCCA
Downstream region at tRNA end position 
attttaggtc
Secondary structure (Cloverleaf model)
>WENV170969195	Trp	CCA
                   t      GCCA attttaggtc
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | + + | |     G
    T       C T T G       G T G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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