The detailed information of tRNA gene sequence


Sequence ID>WENV170969262
Genome IDMTKW01024025
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 175
End posion on genome 249
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
caattcaaat
tRNA gene sequence 
GGCCCATTCGTCTATCGGTTAGGACGCAAGATTTTCATTCTTGAAAGAGGGGTTCGATTC
CCCTATGGGCTACAA
Downstream region at tRNA end position 
gaaaaagatt
Secondary structure (Cloverleaf model)
>WENV170969262	Glu	TTC
                   t      ACAA gaaaaagatt
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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