The detailed information of tRNA gene sequence


Sequence ID>WENV170969313
Genome IDMTKW01025236
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3188
End posion on genome 3097
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taggcggtgc
tRNA gene sequence 
GGAGAGGTGGCTGAGATGGTCTAAGGCGCTCGCCTGGAGAGCGAGTAAGCAGTGACCCTG
CTTCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttttgttcta
Secondary structure (Cloverleaf model)
>WENV170969313	Ser	GGA
                   c      GCCA ttttgttcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T A G A        G      | | | | |     G
  G         G T C G       G T G G G     C
  G           + | |                 T T
  T         A G G C
    C T A          G     TAAGCAGTGACCCTGCTTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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