The detailed information of tRNA gene sequence


Sequence ID>WENV170969522
Genome IDMTKW01031300
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 300
End posion on genome 376
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ctgcacgcag
tRNA gene sequence 
CGGGGCGTAGCGCAGTTTGGTAGCGCGCTTGGTTCGGGACCAAGAGGTCGCGAGTTCAAA
TCTCGCCGCTCCGACCA
Downstream region at tRNA end position 
ggaaacccca
Secondary structure (Cloverleaf model)
>WENV170969522	Pro	CGG
                   g      ACCA ggaaacccca
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     C G C T C     A
      T G A        A      | | | | |     A
    T       C G C G       G C G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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