The detailed information of tRNA gene sequence


Sequence ID>WENV170969679
Genome IDMTKW01036086
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1314
End posion on genome 1390
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ccgcaaggtc
tRNA gene sequence 
GGGCCTTTAGCTCAGCCGGCTAGAGCACTCCTCTGATAAGGGAGAGGTCTCTGGTTCGAG
TCCAGAAAGGCCCACAA
Downstream region at tRNA end position 
ggcgatgggg
Secondary structure (Cloverleaf model)
>WENV170969679	Ile	GAT
                   c      ACAA ggcgatgggg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     A G A C C     A
      C G A        A      | | | | |     G
    C       C T C G       T C T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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