The detailed information of tRNA gene sequence


Sequence ID>WENV170969729
Genome IDMTKW01037725
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 28027
End posion on genome 27953
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atactattca
tRNA gene sequence 
GGGCCTATAGCTCAGCTGGTTAGAGCACCTGACTCATAATCAGGGGGTCACTGGTTCAAG
CCCAGTTAGGCCCACtc
Downstream region at tRNA end position 
accataagca
Secondary structure (Cloverleaf model)
>WENV170969729	Met	CAT
                   a      ACtc accataagca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          C G
                    T     T G A C C     A
      C G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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