The detailed information of tRNA gene sequence


Sequence ID>WENV170969789
Genome IDMTKW01039602
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5626
End posion on genome 5537
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaactcttag
tRNA gene sequence 
GGTGGGGTGACCGAGCGGTTGAAGGTGGCAGTCTTGAAAACTGTTGTGCCGGTGACGGTA
CCGTGAGTTCGAATCTCACCCCCACCGCCC
Downstream region at tRNA end position 
tttaaatcat
Secondary structure (Cloverleaf model)
>WENV170969789	Ser	TGA
                   g      GCCC tttaaatcat
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G C C A       G T G A G     C
    G         | | |                 T T
    T       A G G T
      T G A        G     TGTGCCGGTGACGGTACC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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