The detailed information of tRNA gene sequence


Sequence ID>WENV170969799
Genome IDMTKW01039935
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1268
End posion on genome 1195
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tggctacacc
tRNA gene sequence 
GGGCAGGTAGATCAGTTGGAAGATCGCTACCTTGGCATGGTAGAGGCCGGGGGTTCAAAT
CCCCCCCTGTCCACtt
Downstream region at tRNA end position 
tcattctaac
Secondary structure (Cloverleaf model)
>WENV170969799	Ala	GGC
                   c      ACtt tcattctaac
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        A      | | | | |     A
    T       C T A G       G G G G G     C
    G       | | | |                 T T
    G       G A T C
      A A          G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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