The detailed information of tRNA gene sequence


Sequence ID>WENV170969827
Genome IDMTKW01040989
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1670
End posion on genome 1595
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttttttatcT
tRNA gene sequence 
GGGCGGCTAGCTCAGCTGGTTAGAGCGCCGCTTTCACACGGCGGAGGTCAGCAGTTCGAA
TCTGCTGTCGCCCATtt
Downstream region at tRNA end position 
gacgtaactg
Secondary structure (Cloverleaf model)
>WENV170969827	Val	CAC
                   T      ATtt gacgtaactg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     C - G          T A
                    T     T C G T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    T + G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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