The detailed information of tRNA gene sequence


Sequence ID>WENV170969840
Genome IDMTKW01041431
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3010
End posion on genome 3095
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccactttttt
tRNA gene sequence 
GGAGAGATGGTAGAGTGGTCGATTACAGCGGTCTTGAAAACCGCCGTACCGAGAGGTACC
GGGGGTTCGAATCCCTCTCTCTCCGCat
Downstream region at tRNA end position 
atatcaattt
Secondary structure (Cloverleaf model)
>WENV170969840	Ser	TGA
                   t      GCat atatcaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A T G       G G G G G     C
    G       + | | |                 T T
    T       T T A C
      C G A        A     CGTACCGAGAGGTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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