The detailed information of tRNA gene sequence


Sequence ID>WENV170969895
Genome IDMTKW01043518
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 942
End posion on genome 1028
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctgcaagtt
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTTGATTGGGGCGGTCTCGAAAACCGTTGTGGTCTCTGACCAC
CGTGGGTTCGAATCCCACCCTCTCCGCtg
Downstream region at tRNA end position 
agcaatactg
Secondary structure (Cloverleaf model)
>WENV170969895	Ser	CGA
                   t      GCtg agcaatactg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G       + | | |                 T T
    T       T T G G
      T G A        G     TGTGGTCTCTGACCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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