The detailed information of tRNA gene sequence


Sequence ID>WENV170969925
Genome IDMTKW01045165
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 850
End posion on genome 936
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aattctgatT
tRNA gene sequence 
GGAGAGATGTCCGAGCGGTCGAAGGAGGCGGTCTTGAAAACCGTTGAGATGCAAGTCTCC
GGGGGTTCGAATCCCTCTCTCTCCGTat
Downstream region at tRNA end position 
ggacctttcc
Secondary structure (Cloverleaf model)
>WENV170969925	Ser	TGA
                   T      GTat ggacctttcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TGAGATGCAAGTCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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