The detailed information of tRNA gene sequence


Sequence ID>WENV170969967
Genome IDMTKW01046687
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1256
End posion on genome 1352
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
acaattgaat
tRNA gene sequence 
GGGAGTAGATGGGTGCTGGTGTGTCCTCTGGTCTTCAAAACCAGTATGAGGGGTTAGGAG
CTTCTTGGGTGGGTTCGATTCCCACATACTCCCGCCA
Downstream region at tRNA end position 
tataagtaat
Secondary structure (Cloverleaf model)
>WENV170969967	SeC(p)	TCA
                   t      GCCA tataagtaat
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G   A          T T
                    A     C A C C C     A
      T C G        T      | | | | |     G
    G       T G G G       G T G G G     C
    G       + + | |                 T T
    T       G T C C
      G T          T     TATGAGGGGTTAGGAGCTTCTTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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