The detailed information of tRNA gene sequence


Sequence ID>WENV170970045
Genome IDMTKW01049892
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 456
End posion on genome 380
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgtcgcgcat
tRNA gene sequence 
GGGCCATTAGCTCAGTTGGTCAGAGCAGCCGGCTCATAACCGGTCGGTCCGGGGTTCAAG
TCCCTGATGGCCCACCA
Downstream region at tRNA end position 
tttatcaatc
Secondary structure (Cloverleaf model)
>WENV170970045	Met	CAT
                   t      ACCA tttatcaatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     CGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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