The detailed information of tRNA gene sequence


Sequence ID>WENV170970124
Genome IDMTKW01053503
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1232
End posion on genome 1144
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tattaaatat
tRNA gene sequence 
GGAGAGGTATCGAAGTGGTCATAACGGGGCTGACTCGAAATCAGTTTGGGAGCAATCCCA
CGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
ttgaataatc
Secondary structure (Cloverleaf model)
>WENV170970124	Ser	CGA
                   t      GCCA ttgaataatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    G T G A        A      | | | | |     G
  G         A G C T       G C G G G     C
  T           | | +                 T T
  C         A C G G
    A T A          G     TTGGGAGCAATCCCAC
                    G + T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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