The detailed information of tRNA gene sequence


Sequence ID>WENV170970137
Genome IDMTKW01054189
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 229
End posion on genome 305
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaacagacag
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCTGGTTCAAA
TCCAGCCCCCGCAACCA
Downstream region at tRNA end position 
acaacgaaaa
Secondary structure (Cloverleaf model)
>WENV170970137	Met	CAT
                   g      ACCA acaacgaaaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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