The detailed information of tRNA gene sequence


Sequence ID>WENV170970169
Genome IDMTKW01055783
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 955
End posion on genome 866
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcggtcttaa
tRNA gene sequence 
GGAAGGGTGCCAGAGCGGACGAATGGAGCGGTCTTGAAAACCGTCGAGGGTTTGCCCCCT
CCGTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
gcgtgcgtcc
Secondary structure (Cloverleaf model)
>WENV170970169	Ser	TGA
                   a      GCCA gcgtgcgtcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        A     CGAGGGTTTGCCCCCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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