The detailed information of tRNA gene sequence


Sequence ID>WENV170970190
Genome IDMTKW01056270
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1559
End posion on genome 1483
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ctggcgttgg
tRNA gene sequence 
CGGGGTGTGGCGCAGCTTGGTAGCGCGCAGCGTTTGGGACGCTGAAGTCGGAGGTTCAAG
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
gtgcgggagt
Secondary structure (Cloverleaf model)
>WENV170970190	Pro	TGG
                   g      ACCA gtgcgggagt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T C T C C     A
      C G A        G      + | | | |     A
    T       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AAGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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