The detailed information of tRNA gene sequence


Sequence ID>WENV170970199
Genome IDMTKW01056967
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 724
End posion on genome 813
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgtccatcgc
tRNA gene sequence 
GGAGGGGTGGCAGAGCGGTTGAATGCGGCAGTCTTGAAAACTGTTGAGGGTGCAAGCCCT
CCGTGGGTTCGAATCCCACCCACTCCGCCA
Downstream region at tRNA end position 
ctggtactct
Secondary structure (Cloverleaf model)
>WENV170970199	Ser	TGA
                   c      GCCA ctggtactct
                     G - C
                     G - C
                     A - T
                     G - C
                     G   A
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TGAGGGTGCAAGCCCTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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