The detailed information of tRNA gene sequence


Sequence ID>WENV170970217
Genome IDMTKW01057404
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 728
End posion on genome 654
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcagtacttt
tRNA gene sequence 
GGGGGCGTAGTTCAGTTGGTCAGAACGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCGCTCCCGCtc
Downstream region at tRNA end position 
ccaagagggg
Secondary structure (Cloverleaf model)
>WENV170970217	Asp	GTC
                   t      GCtc ccaagagggg
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T C A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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