The detailed information of tRNA gene sequence


Sequence ID>WENV170970258
Genome IDMTKW01058784
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 587
End posion on genome 672
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ataaatttat
tRNA gene sequence 
GGAGGGATGTCCGAATGGCAAGGGGCCGGTCTTGAAAACCGGTGTAGGCGTAAGCTGTCT
GGGTTCGAATCCCAGTCCCTCCGCCA
Downstream region at tRNA end position 
gtttttttat
Secondary structure (Cloverleaf model)
>WENV170970258	Ser	TGA
                   t      GCCA gtttttttat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
        A A        G      | | | | |     G
      T     G C C T       C T G G G     C
      G       | | +                 T T
      G     A G G G
        C A        G     TGTAGGCGTAAGCTGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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