The detailed information of tRNA gene sequence


Sequence ID>WENV170970301
Genome IDMTKW01061716
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2628
End posion on genome 2704
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
catgagacgt
tRNA gene sequence 
GCCGCATTCGTCTAGAGGCCTAGGACACCTCCCTCTCAAGGAGGAGATCGGGGGTTCGAA
TCCCCCATGCGGCACCA
Downstream region at tRNA end position 
acctgggcgg
Secondary structure (Cloverleaf model)
>WENV170970301	Glu	CTC
                   t      ACCA acctgggcgg
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A          T A
                    T     C C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       G G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     AGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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