The detailed information of tRNA gene sequence


Sequence ID>WENV170970329
Genome IDMTKW01063301
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 516
End posion on genome 443
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aacaaacaaa
tRNA gene sequence 
GGGCCCGTAGCTTAGTTGGTAGAGCGCTACTATGGCATAGTAGAGGTCAGGGGTTCGAGT
CCCCTCGGGTCCACtt
Downstream region at tRNA end position 
gtcaattacc
Secondary structure (Cloverleaf model)
>WENV170970329	Ala	GGC
                   a      ACtt gtcaattacc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       T T C G       A G G G G     C
    G       + | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    T - A
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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