The detailed information of tRNA gene sequence


Sequence ID>WENV170970367
Genome IDMTKW01065177
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 10420
End posion on genome 10494
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taaagcacaC
tRNA gene sequence 
AGGTCAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAAT
CCCTCCTGACCTGGtt
Downstream region at tRNA end position 
tcactgacgg
Secondary structure (Cloverleaf model)
>WENV170970367	Trp	CCA
                   C      GGtt tcactgacgg
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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