The detailed information of tRNA gene sequence


Sequence ID>WENV170970411
Genome IDMTKW01068286
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1630
End posion on genome 1536
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gaattaccac
tRNA gene sequence 
GGGGGTGGATTGGTCCTGGTGGGCCGCCTGGACTTCAAATCCAGTGGGGGGCGTGGCCCG
TCCCCGGTGGGTTCGATTCCCACACACTCCCGCCA
Downstream region at tRNA end position 
agaatagata
Secondary structure (Cloverleaf model)
>WENV170970411	SeC(p)	TCA
                   c      GCCA agaatagata
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C C        T      | | | | |     G
    G       T G G T       G T G G G     C
    G       + | | +                 T T
    T       G C C G
      G G          C     TGGGGGGCGTGGCCCGTCCCCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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