The detailed information of tRNA gene sequence


Sequence ID>WENV170970455
Genome IDMTKW01070839
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 831
End posion on genome 755
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcctcgatgg
tRNA gene sequence 
CGGGGTGTGGCGCAGACCGGTAGCGCGCGGCGTTTGGGACGCTGAGGTCGGAGGTTCAAG
TCCTCTCACCCCGACTA
Downstream region at tRNA end position 
ggtggtgttt
Secondary structure (Cloverleaf model)
>WENV170970455	Pro	TGG
                   g      ACTA ggtggtgttt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T C T C C     A
      A G A        G      + | | | |     A
    C       C G C G       G G A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    G + T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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