The detailed information of tRNA gene sequence


Sequence ID>WENV170970516
Genome IDMTKW01074670
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 453
End posion on genome 363
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cagcgcctac
tRNA gene sequence 
GGAGGGGTGCCGGAGCGGCCGATCGGGGCGGTCTCGAAAATCGTTGTGGGGCATGTCCTC
ACCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
aaagtgaagc
Secondary structure (Cloverleaf model)
>WENV170970516	Ser	CGA
                   c      GCCA aaagtgaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    C       T C G G
      C G A        G     TGTGGGGCATGTCCTCACC
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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