The detailed information of tRNA gene sequence


Sequence ID>WENV170970627
Genome IDMTKW01080642
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1686
End posion on genome 1613
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tcggtcttaa
tRNA gene sequence 
GGCGACGTAGCCAAGCGGTAAGGCAGAGGACTGCAAATCCTTTACCCCCGGTTCAAATCC
GGGCGTCGCCTCCA
Downstream region at tRNA end position 
agagggcggc
Secondary structure (Cloverleaf model)
>WENV170970627	Cys	GCA
                   a      TCCA agagggcggc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     G G G C C     A
        G A        A      | | | | |     A
      C     A C C G       C C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TACC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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