The detailed information of tRNA gene sequence


Sequence ID>WENV170970713
Genome IDMTKW01085696
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1735
End posion on genome 1822
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aagaaggcgc
tRNA gene sequence 
GGAGAGATGCGGGAGTGGTTGATCCGGGCGGTCTCGAAAACCGTTGAACCTTCGGGTTCC
GTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
taactaggta
Secondary structure (Cloverleaf model)
>WENV170970713	Ser	CGA
                   c      GCCA taactaggta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G G C       G T G G G     C
    G       + | | |                 T T
    T       T C C G
      T G A        G     TGAACCTTCGGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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