The detailed information of tRNA gene sequence


Sequence ID>WENV170970777
Genome IDMTKW01088319
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2285
End posion on genome 2197
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tactgctttT
tRNA gene sequence 
GGAGAGGTGCCAGAGCGGTCGAATGGGACGGTCTTGAAAACCGTTGTACAGGTTCCTGTA
CCGAGGGTTCGAATCCCTCCCTCTCCGTag
Downstream region at tRNA end position 
tgttaatcta
Secondary structure (Cloverleaf model)
>WENV170970777	Ser	TGA
                   T      GTag tgttaatcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G         | | |                 T T
    T       A T G G
      C G A        G     TGTACAGGTTCCTGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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