The detailed information of tRNA gene sequence


Sequence ID>WENV170970803
Genome IDMTKW01090293
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 391
End posion on genome 467
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acatctgcat
tRNA gene sequence 
CGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCAGAGGTTCAAA
TCCTCTCCCCGCAACCA
Downstream region at tRNA end position 
attttccgag
Secondary structure (Cloverleaf model)
>WENV170970803	Met	CAT
                   t      ACCA attttccgag
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T C C     A
      C G A        G      | | | | |     A
    C       C G A G       A G A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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