The detailed information of tRNA gene sequence


Sequence ID>WENV170970812
Genome IDMTKX01000050
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 303
End posion on genome 216
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taagtttttt
tRNA gene sequence 
GGAGCGATGGGTGAGAGGCTTAAACCAGCAGTTTGCTAAACTGCCGTACGGGTGACCGTA
CCGGGGGTTCGAATCCCCCTCTCTCCGCag
Downstream region at tRNA end position 
aagacaaggc
Secondary structure (Cloverleaf model)
>WENV170970812	Ser	GCT
                   t      GCag aagacaaggc
                     G - C
                     G - C
                     A - T
                     G - C
                     C   T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTACGGGTGACCGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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