The detailed information of tRNA gene sequence


Sequence ID>WENV170970814
Genome IDMTKX01000052
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 45478
End posion on genome 45406
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acgctgaaac
tRNA gene sequence 
CGGGACGTAGCCTAGGGGCTAAGGCGTCTGCTTTGGGAGCAGAAGATCGGAGGTTCAAAT
CCTCTCGTCCCGAata
Downstream region at tRNA end position 
ccgaatacga
Secondary structure (Cloverleaf model)
>WENV170970814	Pro	TGG
                   c      Aata ccgaatacga
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
      G G A        A      + | | | |     A
    G       T C C G       G G A G G     C
    G       | | | |                 T T
    C       A G G C
      T A          G     AGATC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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