The detailed information of tRNA gene sequence


Sequence ID>WENV170970823
Genome IDMTKX01000066
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 161662
End posion on genome 161588
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ccgaacggaa
tRNA gene sequence 
CGGGGAGTGGCGCAGCCCGGCTAGCGCGCCTGCCTTGGGAGCAGGAGGTCGGCGGTTCAA
ATCCGCTCTCCCCGAtct
Downstream region at tRNA end position 
tttttccacg
Secondary structure (Cloverleaf model)
>WENV170970823	Pro	TGG
                   a      Atct tttttccacg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C G C C     A
    C C G A        G      + | | | |     A
  C         C G C G       G G C G G     C
  G         | | | |                 T T
  G         G C G C
    C T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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