The detailed information of tRNA gene sequence


Sequence ID>WENV170970826
Genome IDMTKX01000081
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 50722
End posion on genome 50797
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
catggctggc
tRNA gene sequence 
GGGGATGTAGCTCAGTTGGTAGAGCGCTGCTTTCGCAAGGCAGAGGCCGGCGGTTCGAGT
CCGCTCATCTCCACCA
Downstream region at tRNA end position 
gaatcctccc
Secondary structure (Cloverleaf model)
>WENV170970826	Ala	CGC
                   c      ACCA gaatcctccc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T C G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    C - G
                    T - A
                    G - C
                    C - G
                    T + G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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